BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034A11LP1|AL429845
(847 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1415 1588 0.0
>3x_Contig1415
Length = 6436
Score = 1588 bits (794), Expect = 0.0
Identities = 830/848 (97%), Gaps = 1/848 (0%)
Strand = Plus / Minus
Query: 1 gatcaccgattgttcgcacaattgtttattagatgcaacagaagaaactctggagctaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2451 gatcaccgattgttcgcacaattgtttattagatgcaacagaagaaactctggagctaat 2392
Query: 61 aatgaagtatacatgaacgtgaaaattggaggagtgaaaaagtcaaaagcagaatcaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2391 aatgaagtatacatgaacgtgaaaattggaggagtgaaaaagtcaaaagcagaatcaaat 2332
Query: 121 cagatgcacccaaaacgtttgagggatattattatctaacaaaagggtgaagtaagaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2331 cagatgcacccaaaacgtttgagggatattattatctaacaaaagggtgaagtaagaaga 2272
Query: 181 aacctgtctttaaaacttatacacacagtgtactatcacacacgagtctaaacataatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2271 aacctgtctttaaaacttatacacacagtgtactatcacacacgagtctaaacataatca 2212
Query: 241 gagaaatatatagaaaagataatgtgtgaaaaagcmagcccatagattaattggttttta 300
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 2211 gagaaatatatagaaaagataatgtgtgaaaaagcaagcacatagattaattggttttta 2152
Query: 301 tttcacttaactcataaacttagggatgggaattaggacatgcmatcagtttcaaacggr 360
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 2151 tttcacttaactcataaacttagggatgggaattaggacatgcaatcagtttcaaacgga 2092
Query: 361 tggrctctgtttaatccaacttgatcctgacggccttgatttgagtgttagattcgamag 420
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 2091 tggactctgtttaatccaacttgatcctgacggccttgatttgagtgtaagattcgaaag 2032
Query: 421 cytcttcacccatttctctaccgtcaccagattgcttgtcaccaccgaatggaacggcag 480
| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 2031 cttcttcacccatttctctaccgtaaccagattgcttgtaaccaccgaatggaacggcag 1972
Query: 481 cgtcgaaatcgttgtwagtgttgatccagacggtaccagcttttagtctctttgcgacct 540
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1971 cgtcgaaatcgttgtaagtgttgatccagacggtaccagcttttagtctctttgcgacct 1912
Query: 541 tcaaggcaacggagatgttttcagtttcgataccagcacccaaaccgaattcggagtcgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1911 tcaaggcaacggagatgttttcagtttcgataccagcacccaaaccgaattcggagtcgt 1852
Query: 601 tagccaaagcgaca-cytcgtcgacagttgagaacttggagatggtgacgacaggrccaa 659
|||||||||||||| | ||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 1851 tagccaaagcgacagcttcgtcgacagtagagaacttggagatggtgacgacaggaccaa 1792
Query: 660 agatttcttccttgacgattctcatatcttccttaacgttgtagaatacagttggkttaa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1791 agatttcttccttgacgattctcatatcttccttaacgttgtagaatacagttggtttaa 1732
Query: 720 tgaagtaacccttgttgcctactctttcaccaccagtcaagatagaagcaccttccttct 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1731 tgaagtaacccttgttgcctactctttcaccaccagtcaagatagaagcaccttccttct 1672
Query: 780 taccgatgtcgatgtagttcaagatagtttcgaattgagccttgttgttgatagcagcct 839
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1671 taccgatgtcgatgtagttcaagatagtttcgaattgagccttgttgttgatagcagctt 1612
Query: 840 ggragtta 847
|| |||||
Sbjct: 1611 ggaagtta 1604
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5781
Number of Sequences: 1807
Number of extensions: 5781
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 847
length of database: 10,358,551
effective HSP length: 16
effective length of query: 831
effective length of database: 10,329,639
effective search space: 8583930009
effective search space used: 8583930009
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)